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    Delmarvalicious Dishes » Recipes

    Healthy Hidden Veggie Mac and Cheese (stovetop recipe)

    Published: Jan 31, 2021 · Modified: Jan 15, 2025 by Lynne Kenton · This post may contain affiliate links · Leave a Comment

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    Healthy Hidden Veggie Mac and Cheese is a stovetop mac and cheese recipe that uses butternut squash and carrots to create a creamy and cheesy sauce. This is the ultimate comfort food makeover! 

    A bowl of shell pasta takes center stage, draped in a creamy yellow sauce reminiscent of veggie mac and cheese, with a wooden spoon resting on top. Nearby, a grater sits poised on the marble surface, while a cloth napkin peeks out subtly.

    Now that the holidays are over, I am trying to eat lighter and incorporate more wholesome foods into my diet. However, cold weather and snow have me craving all of the warm, cozy foods like mac and cheese! This kid-friendly recipe is a combination of cozy food with a healthy, vegetable kick! 

    Butternut squash and carrots are combined to create a creamy cheese sauce in this recipe. If you love butternut squash like I do, try one of these recipes! This Caramelized Butternut Squash and Feta Salad for a light and healthy side dish! Or, try this Healthy Salmon Buddha Bowl with Roasted Vegetables for a full meal that is perfect for meal prepping. 

    Jump to:
    • Why You'll Love This Recipe 
    • Ingredients
    • Step-by-Step Instructions
    • Variations
    • Substitutions
    • Equipment
    • Storage
    • Top tip
    • FAQ
    • Related
    • Pairing
    • 📖 Recipe

    Why You'll Love This Recipe 

    • Sneaky nutrition! If you have a picky eater, this recipe is a great way to sneak some vegetables into their diet. 
    • Comfort food with a healthy twist. 
    • Better the next day! If you love leftovers, this is a great dish. The sauce becomes thicker and creamier after it is refrigerated. 

    Ingredients

    Top view of veggie mac and cheese ingredients on a light wooden surface: a measuring cup of vegetable broth, pasta shells, milk, diced white onions, sliced carrots, shredded Gouda cheese, chopped butternut squash, minced garlic, and a spice mix on a small plate.
    • The vegetables are sautéed in extra virgin olive oil until they become soft. (Extra virgin olive oil is not photographed).
    • Sauteed onions and garlic cloves are used to balance out the natural sweetness of the butternut squash and carrots. 
    • Butternut squash and carrots are blended to create a creamy vegetable sauce. 
    • Ground yellow mustard, salt, and black pepper are used to season and add flavor to the vegetable sauce. 
    • The vegetables are cooked in vegetable broth to keep them moist. 
    • Whole milk, shredded sharp cheddar cheese, and shredded gouda are added to the vegetables to create a delicious cheese sauce. 
    • Pasta shells are used to catch and hold the pasta sauce. 
    • Parmesan cheese is sprinkled on top of the pasta to add texture and flavor. 

    See the recipe card below for exact measurements. 

    Step-by-Step Instructions

    Chopped onions and minced garlic sizzling in a gray pan bring out the savory base for a delightful veggie mac and cheese, with a wooden spoon resting on the rim, ready to stir in creamy goodness.

    Step 1: Heat a large soup pot over medium-low heat and add the extra virgin olive oil. When the extra virgin olive oil is hot, add the white onions and sauté for 4-5 minutes until soft, stirring often. Add the garlic cloves and stir for 30 seconds until fragrant. 

    A pot filled with a simmering mixture of chopped carrots, squash, and onions in a seasoned broth rests on the stovetop, creating an aromatic base for veggie mac and cheese.

    Step 2: Add the chopped butternut squash and carrots to the pot. Season with salt, black pepper, and ground mustard. Add the vegetable broth and bring to a boil. Once boiling cover with a lid and turn the heat down to a simmer. Simmer for 15 minutes. 

    A pot of pasta, perfect for a hearty veggie mac and cheese, boils on the stove. The pasta is partially submerged in the bubbling water, with steam rising briskly to the surface.

    Step 3: While the vegetables are simmering, cook the pasta according to the pasta directions to al dente. Drain pasta and return to the pot. 

    A hand blender is immersed in a pot, blending a thick orange mixture, likely a veggie mac and cheese sauce. The mixture has a smooth, creamy texture, indicating it is in the final stages of preparation.

    Step 4: When the vegetables are fork-tender, use an immersion blender to blend the vegetables into a thick and smooth sauce. 

    Step 5: Once the sauce is smooth, add the whole milk and the shredded cheese. Stir until the sauce is smooth. Add the cooked pasta shells and stir to evenly coat the pasta.

    Two bowls of creamy veggie mac and cheese made with shell pasta rest on a wooden board, each equipped with a spoon. Served on a white marble surface, this dish adds a delicious twist to the classic comfort food favorite.

    Step 6: Serve warm topped with parmesan cheese. 

    Variations

    • As written, this healthy mac and cheese recipe is vegetarian.
    • To make this recipe dairy-free, use plant-based milk, such as almond milk or oat milk, and dairy-free cheese. 
    • To make this recipe gluten-free, use gluten-free pasta. 
    • To make this recipe a complete meal, top the pasta with a protein such as grilled chicken or blackened salmon. 
    • For a little extra nutrition, add in extra vegetables such as bell peppers. 
    • To make this mac and cheese spicy, add hot sauce or a pinch of crushed red peppers. 

    Substitutions

    • Replace the butternut squash and carrots with sweet potatoes for a vegetable that is similar in consistency and color. 
    • Use garlic powder in place of garlic cloves. 
    • Use your favorite pre-shredded cheeses or shred your own cheese! 
    • Use your favorite type of pasta to make this mac and cheese! 

    Equipment

    • Large pot with a lid 
    • Large pot to cook pasta
    • Pasta strainer 
    • Immersion blender or stand blender. Here is the immersion blender that I use and love! 

    Storage

    Store leftover mac and cheese refrigerated in an airtight container. Reheat pasta in the microwave in 30 seconds increments. Top pasta with extra parmesan cheese before serving! 

    Top tip

    To save time, use frozen pre-chopped butternut squash. You won't have to use your vegetable peeler or knife! 

    FAQ

    What are some other vegetables that could be used in this hidden veggie mac and cheese? 

    Use sweet potato cubes or cauliflower florets for a sauce that has the same creamy texture in this homemade mac recipe. 

    Can I leave the vegetables in small chunks when I make veggie mac and cheese?

    When you use your immersion blender to create the vegetable sauce, you may notice that not all of the vegetables become completely smooth. You can either leave these small vegetable chunks or continue to blend the vegetables until completely smooth. 

    How can I enhance the flavor of this mac and cheese?

    Enhance the flavor of this mac and cheese by using strong cheeses like aged, sharp cheddar cheese or gruyere cheese. You can also add a touch of Dijon mustard to the sauce and/or a pinch of smoked paprika. 

    How can I blend the veggies into a sauce if I do not have an immersion blender?

    If you do not have an immersion blender, use a stand blender, handheld electric mixer, or food processor to mix the vegetables into a thick and creamy sauce. 

    Related

    Looking for more vegetable-forward recipes? Try one of these:

    • A sweet potato and halloumi salad elegantly sits in a bowl, featuring leafy greens, roasted sweet potatoes, chickpeas, and pomegranate seeds. Chunks of halloumi cheese are topped with a drizzle of dressing. A wooden table and fresh sweet potatoes complete the backdrop.
      Roasted Sweet Potato and Grilled Halloumi Salad
    • A rectangular tart with golden brown pastry, topped with sliced sweet potatoes and mushrooms. Garnished with herbs. Surrounding the tart are sprigs of greenery and an orange vegetable slice on a light wooden surface.
      Savory Roasted Sweet Potato and Mushroom Tart 
    • Yes, you can make this casserole ahead of time. Simply assemble the casserole, cover with plastic wrap and refrigerate. Remove the casserole from the refrigerator and let it come to room temperature while the oven preheats. You may need to add a few minutes of cooking time to ensure that the casserole is heated thoroughly.
      Sweet Potato and Chorizo Breakfast Casserole
    • A close-up of a white bowl filled with quinoa salad, featuring chunks of beetroot, arugula leaves, and green herbs. The dish appears colorful and fresh, highlighting a healthy and vibrant mix of ingredients.
      Roasted Beet Quinoa Salad with Maple Dijon Dressing

    Pairing

    These are my favorite recipes to pair with veggie mac and cheese!

    • Tray of air fryer chicken tenders with sauces.
      Naked Air Fryer Chicken Tenders (Tysons Chicken) 
    • Salmon fillets on baking sheet with asparagus and potatoes.
      Honey Butter Old Bay Salmon (Easy Sheet Pan Dinner)
    • Two pulled chicken sandwiches stacked on top of each other with Jack Daniels BBQ Sauce and a beer.
      Jack Daniel's Pulled BBQ Chicken (Crockpot Recipe)
    • Gluten Free Chicken Salad on Lettuce Wraps with Red Grapes
      Classic Chicken Salad (Gluten Free)

    📖 Recipe

    A bowl of shell pasta, reminiscent of veggie mac and cheese, coated in a creamy yellow sauce, served with a wooden spoon. The dish rests on a marble surface, paired with a striped yellow and white cloth.
    Print Recipe

    Healthy Hidden Veggie Mac and Cheese (stovetop recipe)

    Healthy Hidden Veggie Mac and Cheese is a stovetop mac and cheese recipe that uses butternut squash and carrots to create a creamy and cheesy sauce. This is the ultimate comfort food makeover! 
    Prep Time10 minutes mins
    Cook Time20 minutes mins
    Total Time30 minutes mins
    Course: Side Dish
    Cuisine: vegetarian
    Servings: 8
    Calories: 463kcal
    Author: Lynne Kenton

    Equipment

    • 2 Large Pots
    • Pasta strainer
    • Immersion blender

    Ingredients

    • 1 tablespoon Extra Virgin Olive Oil
    • 1 cup White Onions Chopped (about half of a large onion)
    • 2 Garlic Cloves Minced
    • 2 cups Butternut Squash Chopped
    • 4 Carrots Peeled and Chopped
    • 1 teaspoon Ground Yellow Mustard
    • 1 teaspoon Salt
    • ½ teaspoon Pepper
    • 3 cups Vegetable Broth
    • 2 cups Whole Milk
    • 1 ½ cups Shredded Gouda Cheese
    • 1 pound Pasta shells
    • Parmesan Cheese

    Instructions

    • Heat a large soup pot over medium-low heat. Add in extra virgin olive oil. Once hot, add the onions and sauté for 3-4 minutes until soft. Add garlic and stir until fragrant, about 30 seconds.
    • To the same pot, add the butternut squash and carrots. Season with salt, black pepper, and ground yellow mustard. Stir to coat.
    • Add the vegetable broth and bring to a boil. Once boiling, cover the pot and let boil for 10-15 minutes (until the butternut squash is soft).
    • While veggies are cooking, cook pasta according to box directions. Cook pasta more al dente as the pasta will continue to cook once mixed with vegetables. Turn heat down to low.
    • Using an immersion blender or a stand blender, blend vegetables into a thick, smooth sauce. Do this carefully as the mixture will be hot.
    • Once smooth, stir in milk and cheese. Add in cooked pasta and stir to combine.

    Notes

    It may seem like the sauce is too runny when you first make it. As the pasta cools, the sauce will become thicker. 

    Nutrition

    Serving: 8g | Calories: 463kcal | Carbohydrates: 56g | Protein: 21g | Fat: 17g | Saturated Fat: 9g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 5g | Cholesterol: 58mg | Sodium: 1.202mg | Potassium: 527mg | Fiber: 4g | Sugar: 9g | Vitamin A: 9.353IU | Vitamin C: 11mg | Calcium: 431mg | Iron: 1mg

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    Lynne Kenton of Delmarvalicious Dishes with ice cream cone

    Hi, I am Lynne and I am happy you are here! I love being in the kitchen welcoming friends and family. At Delmarvalicious Dishes, you will find simple meals, handheld snacks and a mix of coffee and cocktails!

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